MK4MDD

Gene Report

Basic Information
Approved Symbol SLC18A2
Approved Name solute carrier family 18 (vesicular monoamine transporter), member 2
Previous Symbol VMAT2
Symbol Alias SVMT, SVAT
Location 10q25
Position chr10:119036778-119038941 (+)
External Links Entrez Gene: 6571
Ensembl: ENSG00000165646
UCSC: uc001ldd.2
HGNC ID: 10935
No. of Studies (Positive/Negative) 1(1/0) Help
Type Literature-origin; Protein mapped

Positive relationships between SLC18A2 and MDD (count: 1)
Name in Literature Reference Research Type Statistical Result Relation Description Help
VMAT2 Christiansen, 2007 high-risk people P-value=0.007 A specific haplotype in VMAT2, the gene encoding the vesicul...... A specific haplotype in VMAT2, the gene encoding the vesicular monoamine transporter, was significantly associated with depression symptoms in men (p= .007). More...

Positive relationships between SLC18A2 and other components at different levels (count: 0) Help
Positive relationship network of SLC18A2 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. Besides the component related relationships from literature, gene mapped protein and protein mapped gene are also shown in the network. If the mapped gene or protein is not from literature, square node would be used instead of Circle node. Accordingly, the relationship is marked with dot line.
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between SLC18A2 and MDD (count: 0)
Negative relationships between SLC18A2 and other components at different levels (count: 0) Help
SLC18A2 related SNPs in MK4MDD (count: 0)
SLC18A2 related proteins in MK4MDD (count: 1)
SLC18A2 related GO terms (count: 40)
SLC18A2 related KEGG pathways (count: 1)
SLC18A2 related BioCarta pathways (count: 0)
SLC18A2 related Reactome pathways (count: 10)
SLC18A2 related interactors from protein-protein interaction data in HPRD (count: 3)