MK4MDD

SNP Report

Basic Information
Name rs1545843 dbSNP Ensembl
Location Chrchr12:84170289(Forward)
Variant Alleles G/A
Ancestral Allele G
No. of Studies (Positive/Negative) 2 (2/0) Help

Positive relationship between rs1545843 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Kohli MA, 2011 Patients and nomal controls; animal model p = 5.53e-08; OR = 2.84 [95% CI1.92¨C4.21]) The commonSNP rs1545843 (MAF = 0.41 in controls) on chr12q21...... The commonSNP rs1545843 (MAF = 0.41 in controls) on chr12q21.31 showedexperiment-wide signi?cance in a recessive mode of inheritance(AA versus AG+GG) after pplying the permutation-based minimum p method for multiple comparison correction over all tested SNPs and genetic models More...

Relationships between rs1545843 and other components at different levels (count: 4) Help
Genetic/epigenetic locus   Protein and other molecule   Cell and molecular pathway   Neural system   Cognition and behavior   Symptoms and signs   Environment
SNP Gene Region Epigenetic site Protein Molecule Pathway Cell Neurobiological system Brain morphology and function Cognition and behavior Symptoms Signs Environment


Positive relationship network of rs1545843 in MK4MDD
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Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs1545843 and MDD (count: 0)
Negative relationships between rs1545843 and other components at different levels (count: 0) Help
rs1545843 related genes (count: 0)