MK4MDD

Gene Report

Basic Information
Approved Symbol SLC6A1
Approved Name solute carrier family 6 (neurotransmitter transporter), member 1
Previous Name "solute carrier family 6 (neurotransmitter transporter, GABA), member 1"
Symbol Alias GAT1, GABATR, GABATHG
Name Alias "GABA transporter 1"
Location 3p25.3
Position chr3:11078653-11080935 (+)
External Links Entrez Gene: 6529
Ensembl: ENSG00000157103
UCSC: uc010hdq.3
HGNC ID: 11042
No. of Studies (Positive/Negative) 1(1/0) Help
Type Literature-origin

Positive relationships between SLC6A1 and MDD (count: 1)
Name in Literature Reference Research Type Statistical Result Relation Description Help
SLC6A1 Klempan, 2009 patients and normal controls Selected differentially expressed genes in BA44 to BA47 (ANO...... Selected differentially expressed genes in BA44 to BA47 (ANOVA and t-test P < 0.01, fold change 1.3t) More...

Positive relationships between SLC6A1 and other components at different levels (count: 0) Help
Positive relationship network of SLC6A1 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. Besides the component related relationships from literature, gene mapped protein and protein mapped gene are also shown in the network. If the mapped gene or protein is not from literature, square node would be used instead of Circle node. Accordingly, the relationship is marked with dot line.
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between SLC6A1 and MDD (count: 0)
Negative relationships between SLC6A1 and other components at different levels (count: 0) Help
SLC6A1 related SNPs in MK4MDD (count: 0)
SLC6A1 related proteins in MK4MDD (count: 0)
SLC6A1 related GO terms (count: 29)
SLC6A1 related KEGG pathways (count: 0)
SLC6A1 related BioCarta pathways (count: 0)
SLC6A1 related Reactome pathways (count: 5)
SLC6A1 related interactors from protein-protein interaction data in HPRD (count: 1)