MK4MDD

SNP Report

Basic Information
Name rs40184 dbSNP Ensembl
Location ChrchrCHR_HSCHR5_3_CTG1:1437345(Reverse)
Variant Alleles T/C
Ancestral Allele T
No. of Studies (Positive/Negative) 2 (1/1) Help

Positive relationship between rs40184 and MDD (count: 0)
Relationships between rs40184 and other components at different levels (count: 1) Help
Genetic/epigenetic locus   Protein and other molecule   Cell and molecular pathway   Neural system   Cognition and behavior   Symptoms and signs   Environment
SNP Gene Region Epigenetic site Protein Molecule Pathway Cell Neurobiological system Brain morphology and function Cognition and behavior Symptoms Signs Environment


Positive relationship network of rs40184 in MK4MDD
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Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs40184 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description
Pattarachotanant, 2010 patients and normal controls chi(2) = 3.20, degrees of freedom = 1, P-value = 0.073, odds ratio = 0.53 [95% confidence interval = 0.28-1.01] Although not significant, we observed more carriers of the C...... Although not significant, we observed more carriers of the C allele (CC+CT genotypes) in healthy controls than in patients with MDD (chi(2) = 3.20, degrees of freedom = 1, P = 0.073, odds ratio = 0.53 [95% confidence interval = 0.28-1.01]). More...

Negative relationships between rs40184 and other components at different levels (count: 0) Help
rs40184 related genes (count: 0)