MK4MDD

SNP Report

Basic Information
Name rs821616 dbSNP Ensembl
Location Chrchr1:232008852(Forward)
Variant Alleles A/T
Ancestral Allele A
No. of Studies (Positive/Negative) 2 (1/1) Help

Positive relationship between rs821616 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Bosker, 2010 patients and normal controls Significance of candidate SNPs for MDD identified from the l...... Significance of candidate SNPs for MDD identified from the literature within the GAIN MDD GWAS More...

Relationships between rs821616 and other components at different levels (count: 0) Help
Positive relationship network of rs821616 in MK4MDD
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Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs821616 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description
Arias, 2014 Patients and nomal controls p(genotype)=0.16; p(allele)=0.09 Rs3738401 (DISC1), rs1615409 and rs766288 (TSNAX) showed gen...... Rs3738401 (DISC1), rs1615409 and rs766288 (TSNAX) showed genotypic and allelic evidence of association with the risk of MDD (Supplementary Table 2). Logistic regression models controlled for age confirmed the association of these polymorphisms with MDD (Table 1). In detail, rs3738401 AA genotype, rs1615409 AA genotype and rs766288 T allele were associated with lower MDD risk(p=0.004; p=0.0019; p=0.008, respectively). More...

Negative relationships between rs821616 and other components at different levels (count: 0) Help
rs821616 related genes (count: 1)