MK4MDD

SNP Report

Basic Information
Name rs242939 dbSNP Ensembl
Location ChrchrCHR_HSCHR17_2_CTG5:45829832(Forward)
Variant Alleles T/C
Ancestral Allele T
No. of Studies (Positive/Negative) 3 (3/0) Help

Positive relationship between rs242939 and MDD (count: 3)
Reference Research Type Statistical Result Relation Description Help
Bosker, 2010 patients and normal controls Significance of candidate SNPs for MDD identified from the l...... Significance of candidate SNPs for MDD identified from the literature within the GAIN MDD GWAS More...
Liu, 2006 patients and normal controls P-value=0.0002 We observed significant allele (P=0.0008) and genotype (P=0....... We observed significant allele (P=0.0008) and genotype (P=0.0002) association with rs242939, and the haplotype defined by alleles G-G-T for the represent rs1876828, rs242939 and rs242941 was significantly over-represented in major depression patients compared to controls. More...
Xiao Z, 2011 patients and normal controls allelic: P-value = 0.018, genotypic: P-value= 0.022 Allelic association between CRHR1 rs242939 and recurrent MDD...... Allelic association between CRHR1 rs242939 and recurrent MDD was found in our sample (allelic: p = 0.018, genotypic: p = 0.022) with an Odds Ratio 0.454 (95% CI 0.266-0.775). More...

Relationships between rs242939 and other components at different levels (count: 0) Help
Positive relationship network of rs242939 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs242939 and MDD (count: 0)
Negative relationships between rs242939 and other components at different levels (count: 0) Help
rs242939 related genes (count: 0)