SNP Report

Name	rs2287161 dbSNP Ensembl
Location	Chrchr12:106987362(Forward)
Variant Alleles	C/G
Ancestral Allele	C
Annotation	regulatory_region_variant
Consequence to Transcript	regulatory_region_variant(ENST00000008527, ENST00000552790, ENST00000392830, ENST00000240050, ENST00000552029, ENST00000548101, ENST00000550736, ENST00000550496, ENST00000547115)
No. of Studies (Positive/Negative)	2 (2/0)

Reference	Research Type	Statistical Result	Relation Description
Soria, 2010	patients and normal controls		In the MDD subsample, the same SNPs in CRY1 and NPAS2 of the...... In the MDD subsample, the same SNPs in CRY1 and NPAS2 of the combined sample remained associated More...
Hua P, 2014	patients and normal controls		MDD cases had a significantly higher frequency carrying the ...... MDD cases had a significantly higher frequency carrying the C allele and CC genotype in Cry1 rs2287161 and the T allele and TT genotype in Tef rs738499 than controls. More...

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Note:
1. The different color of the nodes denotes the level of the nodes.

Genetic/Epigenetic Locus	Protein and Other Molecule	Cell and Molecular Pathway	Neural System	Cognition and Behavior	Symptoms and Signs	Environment	MDD

2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web