MK4MDD

SNP Report

Basic Information
Name rs2287161 dbSNP Ensembl
Location Chrchr12:106987362(Forward)
Variant Alleles C/G
Ancestral Allele C
Annotation regulatory_region_variant
Consequence to Transcript regulatory_region_variant(ENST00000008527, ENST00000552790, ENST00000392830, ENST00000240050, ENST00000552029, ENST00000548101, ENST00000550736, ENST00000550496, ENST00000547115)
No. of Studies (Positive/Negative) 2 (2/0) Help

Positive relationship between rs2287161 and MDD (count: 2)
Reference Research Type Statistical Result Relation Description Help
Soria, 2010 patients and normal controls In the MDD subsample, the same SNPs in CRY1 and NPAS2 of the...... In the MDD subsample, the same SNPs in CRY1 and NPAS2 of the combined sample remained associated More...
Hua P, 2014 patients and normal controls MDD cases had a significantly higher frequency carrying the ...... MDD cases had a significantly higher frequency carrying the C allele and CC genotype in Cry1 rs2287161 and the T allele and TT genotype in Tef rs738499 than controls. More...

Relationships between rs2287161 and other components at different levels (count: 0) Help
Positive relationship network of rs2287161 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs2287161 and MDD (count: 0)
Negative relationships between rs2287161 and other components at different levels (count: 0) Help
rs2287161 related genes (count: 0)