MK4MDD

SNP Report

Basic Information
Name rs2242446 dbSNP Ensembl
Location Chrchr16:55656513(Forward)
Variant Alleles C/T
Ancestral Allele C
Annotation regulatory_region_variant
Consequence to Transcript regulatory_region_variant(ENST00000568943, ENST00000568529, ENST00000414754, ENST00000568655, ENST00000379906, ENST00000561820, ENST00000566163, ENST00000219833)
No. of Studies (Positive/Negative) 2 (2/0) Help

Positive relationship between rs2242446 and MDD (count: 2)
Reference Research Type Statistical Result Relation Description Help
Bosker, 2010 patients and normal controls Significance of candidate SNPs for MDD identified from the l...... Significance of candidate SNPs for MDD identified from the literature within the GAIN MDD GWAS More...
Hahn, 2008 patients and normal controls odds ratio, OR = 4.15 (1.91-9.02) MPT analyses show significant associations of the norepineph...... MPT analyses show significant associations of the norepinephrine transporter (NET, SLC6A2) -182 T/C (rs2242446) with recurrent depression [odds ratio, OR = 4.15 (1.91-9.02)] More...

Relationships between rs2242446 and other components at different levels (count: 0) Help
Positive relationship network of rs2242446 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs2242446 and MDD (count: 0)
Negative relationships between rs2242446 and other components at different levels (count: 0) Help
rs2242446 related genes (count: 0)