SNP Report

Name	rs1539243 dbSNP Ensembl
Location	Chrchr1:206474444(Forward)
Variant Alleles	T/C
Ancestral Allele	C
No. of Studies (Positive/Negative)	2 (1/1)

Reference	Research Type	Statistical Result	Relation Description
Koido K, 2010	Patients and nomal controls		Significant associations were detected for SNP rs1539243 in ...... Significant associations were detected for SNP rs1539243 in IKBKE (inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon) gene showing different allelic and genotypic distributions in the total as well as in separate diagnostic groups as compared to controls. More...

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Note:
1. The different color of the nodes denotes the level of the nodes.

Genetic/Epigenetic Locus	Protein and Other Molecule	Cell and Molecular Pathway	Neural System	Cognition and Behavior	Symptoms and Signs	Environment	MDD

2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web

Reference	Research Type	Statistical Result	Relation Description
Traks T, 2015	Patients and nomal controls	P-value =0.403	Comparison of allele or haplotype frequencies between cases ...... Comparison of allele or haplotype frequencies between cases and controls was done by chi-squared test. The statistical significance threshold was set to 0.05 for all tests. Ten thousand permutations were used to correct P values for errors of multiple testing. More...