MK4MDD

SNP Report

Basic Information
Name rs110402 dbSNP Ensembl
Location Chrchr17:43880047(Forward)
Variant Alleles G/T/A/C
Ancestral Allele G
Annotation intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant
Consequence to Transcript intron_variant(ENST00000293493, ENST00000314537, ENST00000339069, ENST00000347197, ENST00000352855, ENST00000398285, ENST00000577353, ENST00000582044, ENST00000582766, ENST00000587305)
nc_transcript_variant(ENST00000582044, ENST00000582766, ENST00000587305)
NMD_transcript_variant(ENST00000347197)
upstream_gene_variant(ENST00000580955)
No. of Studies (Positive/Negative) 2 (2/0) Help

Positive relationship between rs110402 and MDD (count: 2)
Reference Research Type Statistical Result Relation Description Help
Papiol, 2007 patients and normal controls rs110402, in CRHR1 gene, was associated with an increased ri...... rs110402, in CRHR1 gene, was associated with an increased risk to present a seasonal pattern and an early age of onset of the first depressive episode. More...
Ishitobi Y, 2012 patients and normal controls The SNP rs110402 and rs242924 in the CRHR1 gene and the rs37...... The SNP rs110402 and rs242924 in the CRHR1 gene and the rs3779250 in the CRHR2 gene were associated with MDD More...

Relationships between rs110402 and other components at different levels (count: 0) Help
Positive relationship network of rs110402 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs110402 and MDD (count: 0)
Negative relationships between rs110402 and other components at different levels (count: 0) Help
rs110402 related genes (count: 1)