SNP Report

Name	rs11030101 dbSNP Ensembl
Location	Chrchr11:27680744(Forward)
Variant Alleles	A/T
Ancestral Allele	A
Annotation	5_prime_UTR_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant; non_coding_exon_variant; upstream_gene_variant
Consequence to Transcript	5_prime_UTR_variant(ENST00000439476, ENST00000525528) downstream_gene_variant(ENST00000532965) intron_variant(ENST00000314915, ENST00000356660, ENST00000395978, ENST00000395980, ENST00000395981, ENST00000395983, ENST00000395986, ENST00000418212, ENST00000420794, ENST00000438929, ENST00000525950, ENST00000530786, ENST00000530861, ENST00000532997, ENST00000533131, ENST00000533246, ENST00000584049) nc_transcript_variant(ENST00000499008, ENST00000499568, ENST00000500662, ENST00000501176, ENST00000502161, ENST00000530313, ENST00000530686, ENST00000584049) NMD_transcript_variant(ENST00000530786) non_coding_exon_variant(ENST00000499008, ENST00000499568, ENST00000500662, ENST00000501176, ENST00000502161, ENST00000530313, ENST00000530686) upstream_gene_variant(ENST00000528035)
No. of Studies (Positive/Negative)	2 (1/1)

Reference	Research Type	Statistical Result	Relation Description
Licinio, 2009	patients and normal controls		Association analyses of patients with MDD and controls showe...... Association analyses of patients with MDD and controls showed that 6 SNPs were associated with MDD (rs12273539, rs11030103, rs6265, rs28722151, rs41282918, and rs11030101) More...

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Note:
1. The different color of the nodes denotes the level of the nodes.

Genetic/Epigenetic Locus	Protein and Other Molecule	Cell and Molecular Pathway	Neural System	Cognition and Behavior	Symptoms and Signs	Environment	MDD

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3. The network is generated using Cytoscape Web

Reference	Research Type	Statistical Result	Relation Description
Pae CU, 2012	Patients and nomal controls		rs10835210 CA and rs11030101 AT genotype frequencies were hi...... rs10835210 CA and rs11030101 AT genotype frequencies were higher in BD and schizophrenia patients than in healthy and MD subjects. No significant association was found with clinical improvement More...

Approved Symbol	Approved Name	Type	No. of Studies (Positive/Negative)
BDNF-AS	BDNF antisense RNA	SNP mapped	0(0/0)
BDNF	brain-derived neurotrophic factor	Literature-origin; SNP mapped; Protein mapped	23(17/6)