MK4MDD

SNP Report

Basic Information
Name rs7713917 dbSNP Ensembl
Location Chrchr5:78829249(Forward)
Variant Alleles A/G
Ancestral Allele G
Annotation downstream_gene_variant; upstream_gene_variant
Consequence to Transcript downstream_gene_variant(ENST00000486157)
upstream_gene_variant(ENST00000384661)
No. of Studies (Positive/Negative) 1 (1/0) Help

Positive relationship between rs7713917 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Rietschel, 2010 patients and normal controls P-value = 1.48E-6 rs7713917 showed nominally significant association in both t...... rs7713917 showed nominally significant association in both the genome-wide association study and the replication samples(p(combined) = 1.48E-6). Further evidence for HOMER1 was obtained through gene-wide analysis while conditioning on the genotypes of rs7713917 (p(combined) = 4.12E-3). More...

Relationships between rs7713917 and other components at different levels (count: 0) Help
Positive relationship network of rs7713917 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs7713917 and MDD (count: 0)
Negative relationships between rs7713917 and other components at different levels (count: 0) Help
rs7713917 related genes (count: 0)