SNP Report

Name	rs9352774 dbSNP Ensembl
Location	Chrchr6:64014812(Forward)
Variant Alleles	A/C
Ancestral Allele	A
Annotation	intron_variant; NMD_transcript_variant
Consequence to Transcript	intron_variant(ENST00000370657, ENST00000370658, ENST00000485906) NMD_transcript_variant(ENST00000485906)
No. of Studies (Positive/Negative)	1 (1/0)

Reference	Research Type	Statistical Result	Relation Description
Aragam, 2011	patients and normal controls	P-value=2.26E(-6)	We identified 40 male-specific and 56 female-specific MDD as...... We identified 40 male-specific and 56 female-specific MDD associated SNPs with P-values less than 10(-4). The best male-specific SNP was rs9352774 (P=2.26x10(-6)) within LGSN gene while the best female-specific SNP was rs2715148 (P=5.64x10(-7)) within PCLO gene. More...

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Note:
1. The different color of the nodes denotes the level of the nodes.

Genetic/Epigenetic Locus	Protein and Other Molecule	Cell and Molecular Pathway	Neural System	Cognition and Behavior	Symptoms and Signs	Environment	MDD

2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web

Approved Symbol	Approved Name	Type	No. of Studies (Positive/Negative)
LGSN	lengsin, lens protein with glutamine synthetase domain	SNP mapped	0(0/0)