SNP Report

Basic Information

Name	rs590557 dbSNP Ensembl
Location	Chrchr2:31461395(Forward)
Variant Alleles	G/A
Ancestral Allele	A
Annotation	intron_variant; upstream_gene_variant
Consequence to Transcript	intron_variant(ENST00000322054, ENST00000541626) upstream_gene_variant(ENST00000398824)
No. of Studies (Positive/Negative)	1 (0/1)

Positive relationship between rs590557 and MDD (count: 0)

Relationships between rs590557 and other components at different levels (count: 0)

Negative relationships between rs590557 and MDD (count: 1)

Reference	Research Type	Statistical Result	Relation Description
Mahon PB, 2010	Patients and nomal controls	sample 1 p=0.0056; sample 2 p=0.0019	Associated with MDD, sample 1 p=0.0056; sample 2 p=0.0019 Associated with MDD, sample 1 p=0.0056; sample 2 p=0.0019

Negative relationships between rs590557 and other components at different levels (count: 0)

rs590557 related genes (count: 2)

Approved Symbol	Approved Name	Type	No. of Studies (Positive/Negative)
EHD3	EH-domain containing 3	Literature-origin; SNP mapped	1(1/0)
CAPN14	calpain 14	SNP mapped	0(0/0)