MK4MDD

SNP Report

Basic Information
Name rs3810950 dbSNP Ensembl
Location Chrchr10:49616573(Forward)
Variant Alleles G/A
Ancestral Allele G
Annotation regulatory_region_variant
PolyPhen: 0.008(ENST00000339797, ENST00000337653)
0.007(ENST00000395562, ENST00000395559, ENST00000351556)
SIFT: deleterious - low confidence(ENST00000339797)
tolerated(ENST00000337653, ENST00000395562, ENST00000395559, ENST00000351556)
Consequence to Transcript regulatory_region_variant(ENST00000339797, ENST00000460699, ENST00000481336, ENST00000337653, ENST00000466590, ENST00000490270, ENST00000395562, ENST00000395559, ENST00000351556, ENST00000374115)
No. of Studies (Positive/Negative) 1 (1/0) Help

Positive relationship between rs3810950 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Grunblatt E, 2011 patients and normal controls P-value = 0.023 For depressive symptoms, we found a nominally significant a...... For depressive symptoms, we found a nominally significant association of rs3810950 with minor and major depression (p = 0.023, genotype; p = 0.008, allele). More...

Relationships between rs3810950 and other components at different levels (count: 0) Help
Positive relationship network of rs3810950 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs3810950 and MDD (count: 0)
Negative relationships between rs3810950 and other components at different levels (count: 0) Help
rs3810950 related genes (count: 1)