SNP Report

Basic Information

Name	rs3732293 dbSNP Ensembl
Location	Chrchr2:74649934(Forward)
Variant Alleles	A/C
Ancestral Allele
Annotation	downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant
Consequence to Transcript	downstream_gene_variant(ENST00000233330, ENST00000272430, ENST00000305557, ENST00000475328, ENST00000492013) intron_variant(ENST00000348227, ENST00000409791, ENST00000426787, ENST00000461531, ENST00000469321, ENST00000469932, ENST00000480089, ENST00000482880, ENST00000493982) nc_transcript_variant(ENST00000461531, ENST00000465134, ENST00000468778, ENST00000469321, ENST00000469932, ENST00000480089, ENST00000482880, ENST00000493982) non_coding_exon_variant(ENST00000465134, ENST00000468778) upstream_gene_variant(ENST00000414130, ENST00000482605, ENST00000518401, ENST00000518863)
No. of Studies (Positive/Negative)	1 (0/1)

Positive relationship between rs3732293 and MDD (count: 0)

Relationships between rs3732293 and other components at different levels (count: 0)

Negative relationships between rs3732293 and MDD (count: 1)

Reference	Research Type	Statistical Result	Relation Description
Wray, 2010	patients and normal controls	P-value <10 -5	associated with MDD(P <10 -5) associated with MDD(P <10 -5)

Negative relationships between rs3732293 and other components at different levels (count: 0)

rs3732293 related genes (count: 4)

Approved Symbol	Approved Name	Type	No. of Studies (Positive/Negative)
HMGA1P8	high mobility group AT-hook 1 pseudogene 8	SNP mapped	0(0/0)
RTKN	rhotekin	SNP mapped	0(0/0)
WDR54	WD repeat domain 54	SNP mapped	0(0/0)
C2orf81	chromosome 2 open reading frame 81	SNP mapped	0(0/0)