SNP Report

Basic Information

Name	rs2898938 dbSNP Ensembl
Location	Chrchr11:3832257(Forward)
Variant Alleles	G/T
Ancestral Allele	G
Annotation	intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant
Consequence to Transcript	intron_variant(ENST00000278243, ENST00000300730, ENST00000396986, ENST00000396991, ENST00000396993, ENST00000459679, ENST00000463452, ENST00000464229, ENST00000464261, ENST00000464441, ENST00000464906, ENST00000465237, ENST00000465307, ENST00000469307, ENST00000475884, ENST00000477358, ENST00000478773, ENST00000479072, ENST00000483829, ENST00000485602, ENST00000487112, ENST00000489571, ENST00000490830, ENST00000492246, ENST00000493547, ENST00000495026, ENST00000496834, ENST00000524661, ENST00000525937, ENST00000528216, ENST00000532017, ENST00000532523, ENST00000532535, ENST00000534498) nc_transcript_variant(ENST00000465237, ENST00000478773, ENST00000483829, ENST00000485602, ENST00000487112, ENST00000489571, ENST00000495026, ENST00000525937, ENST00000532017, ENST00000534498) NMD_transcript_variant(ENST00000464229, ENST00000475884, ENST00000477358, ENST00000490830, ENST00000492246, ENST00000524661, ENST00000528216) upstream_gene_variant(ENST00000464590)
No. of Studies (Positive/Negative)	1 (0/1)

Positive relationship between rs2898938 and MDD (count: 0)

Relationships between rs2898938 and other components at different levels (count: 0)

Negative relationships between rs2898938 and MDD (count: 1)

Reference	Research Type	Statistical Result	Relation Description
Shi, 2011	patients and normal controls	P-value <10-5	associated with MDD(P <10-5 in all subjects) associated with MDD(P <10-5 in all subjects)

Negative relationships between rs2898938 and other components at different levels (count: 0)

rs2898938 related genes (count: 1)