MK4MDD

SNP Report

Basic Information
Name rs2535629 dbSNP Ensembl
Location Chrchr3:52799203(Forward)
Variant Alleles G/A
Ancestral Allele A
Annotation regulatory_region_variant
Consequence to Transcript regulatory_region_variant(ENST00000467268, ENST00000416872, ENST00000449956, ENST00000465243, ENST00000463893, ENST00000464804, ENST00000465314, ENST00000475931, ENST00000495622, ENST00000621946)
No. of Studies (Positive/Negative) 3 (1/2) Help

Positive relationship between rs2535629 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Cross-Disorder Group of the Psychiatric Genomics C, 2013 patients and normal controls 2.54E-12

Relationships between rs2535629 and other components at different levels (count: 2) Help
Genetic/epigenetic locus   Protein and other molecule   Cell and molecular pathway   Neural system   Cognition and behavior   Symptoms and signs   Environment
SNP Gene Region Epigenetic site Protein Molecule Pathway Cell Neurobiological system Brain morphology and function Cognition and behavior Symptoms Signs Environment


Positive relationship network of rs2535629 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs2535629 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description
Sasayama D, 2014 patients and normal controls P-value=0.092

Negative relationships between rs2535629 and other components at different levels (count: 1) Help


rs2535629 related genes (count: 0)