MK4MDD

SNP Report

Basic Information
Name rs1800866 dbSNP Ensembl
Location Chrchr9:34637693(Forward)
Variant Alleles T/G
Ancestral Allele T
Annotation regulatory_region_variant
PolyPhen: 0(ENST00000353468, ENST00000277010, ENST00000477726)
SIFT: tolerated - low confidence(ENST00000353468, ENST00000277010, ENST00000477726)
Consequence to Transcript regulatory_region_variant(ENST00000605275, ENST00000378892, ENST00000353468, ENST00000277010, ENST00000477726, ENST00000461426, ENST00000497006, ENST00000478146)
No. of Studies (Positive/Negative) 1 (1/0) Help

Positive relationship between rs1800866 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Kishi, 2010 patients and normal controls In the logistic regression analysis, we detected an associat...... In the logistic regression analysis, we detected an association of the phenotypes (MDD or controls) with rs1800866 genotype. More...

Relationships between rs1800866 and other components at different levels (count: 0) Help
Positive relationship network of rs1800866 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs1800866 and MDD (count: 0)
Negative relationships between rs1800866 and other components at different levels (count: 0) Help
rs1800866 related genes (count: 1)