MK4MDD

SNP Report

Basic Information
Name rs13293512 dbSNP Ensembl
Location Chrchr9:94167461(Forward)
Variant Alleles T/C
Ancestral Allele T
Annotation regulatory_region_variant
Consequence to Transcript regulatory_region_variant(ENST00000602703)
No. of Studies (Positive/Negative) 1 (1/0) Help

Positive relationship between rs13293512 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Liang, 2015 Patients and nomal controls CC vs. TT: OR=1.83, 95% CI=1.12¨C2.99, P=0.015; CC vs. TT/TC: OR=1.84, 95% CI=1.20¨C2.81, P=0.005; and C vs. T: OR=1.32, 95% CI,1.03¨C1.68, P=0.03, respectively Similarly increased risk was also observed for the rs1329351...... Similarly increased risk was also observed for the rs13293512 (CC vs. TT: OR=1.83, 95% CI=1.12¨C2.99, P=0.015; CC vs. TT/TC: OR=1.84, 95% CI, 1.20¨C2.81, P=0.005; and C vs. T: OR=1.32, 95% CI, 1.03¨C1.68, P=0.03, respectively). Stratification analysis showed that patients with the rs13293512 TC and CC genotypes had a 2.29 and 2.56-fold increased risk of MDD recurrence after treatment (TC vs. TT: 95%CI, 1.23¨C4.25, P=0.008; CC vs. TT: 95% CI, 1.25¨C5.23, P=0.009, respectively). More...

Relationships between rs13293512 and other components at different levels (count: 0) Help
Positive relationship network of rs13293512 in MK4MDD
Network loading ...

Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs13293512 and MDD (count: 0)
Negative relationships between rs13293512 and other components at different levels (count: 0) Help
rs13293512 related genes (count: 0)