SNP Report

Name	rs11569017 dbSNP Ensembl
Location	Chrchr4:110902111(Forward)
Variant Alleles	A/T
Ancestral Allele	A
Annotation	downstream_gene_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant PolyPhen: benign(ENST00000509793, ENST00000265171, ENST00000503392) SIFT: deleterious(ENST00000509793) tolerated(ENST00000265171, ENST00000503392)
Consequence to Transcript	downstream_gene_variant(ENST00000502579, ENST00000541061) missense_variant(ENST00000509793, ENST00000265171, ENST00000503392) nc_transcript_variant(ENST00000509996, ENST00000511228) non_coding_exon_variant(ENST00000509996, ENST00000511228)
No. of Studies (Positive/Negative)	1 (1/0)

Reference	Research Type	Statistical Result	Relation Description
Tian W, 2012	patients and normal controls	P-value =0.0027	None of the informative SNPs showed an allelic association w...... None of the informative SNPs showed an allelic association with MDD, but the cis-phase interaction between rs11569017 and rs11569126 was strongly associated with the illness (P=0.0027). More...

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Note:
1. The different color of the nodes denotes the level of the nodes.

Genetic/Epigenetic Locus	Protein and Other Molecule	Cell and Molecular Pathway	Neural System	Cognition and Behavior	Symptoms and Signs	Environment	MDD

2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web

Approved Symbol	Approved Name	Type	No. of Studies (Positive/Negative)
EGF	epidermal growth factor	Literature-origin; SNP mapped; Protein mapped	1(0/1)