SNP Report

Name	rs112439044 dbSNP Ensembl
Location	Chrchr1:41220077(Forward)
Variant Alleles	C/T
Ancestral Allele	C
Annotation	downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant
Consequence to Transcript	downstream_gene_variant(ENST00000453631, ENST00000530965, ENST00000531464) intron_variant(ENST00000308733, ENST00000372651, ENST00000372652, ENST00000372653, ENST00000372654, ENST00000372669, ENST00000414185, ENST00000416859, ENST00000424419, ENST00000425457, ENST00000427410, ENST00000440226, ENST00000447388, ENST00000456393, ENST00000467203, ENST00000525290) nc_transcript_variant(ENST00000362104, ENST00000424419, ENST00000467203) non_coding_exon_variant(ENST00000362104) upstream_gene_variant(ENST00000385227, ENST00000525349)
No. of Studies (Positive/Negative)	1 (1/0)

Reference	Research Type	Statistical Result	Relation Description
Xu, 2010	patients and normal controls	allelic P-value=0.0287; genotypic P-value=0.0275	We detected a statistically significant positive association...... We detected a statistically significant positive association between miR-30e ss178077483 (rs112439044) and MDD (allelic P=0.0287; genotypic P=0.0275). More...

Name in Literature	Related Components
	Level	Approved Name(Name in Literature)	Type	Reference	Research Type	Statistical Result	Relation Description	All
rs112439044		P300(P300)	neurobiological system	Xu, 2010	patients and normal controls	P-value=0.009	The P300 latency was associated with miR-30e ss178077483 (rs...... The P300 latency was associated with miR-30e ss178077483 (rs112439044) genotypes and the individuals with the C/T genotype have a longer P300 latency than those carrying the C/C genotype (P=0.009). More...

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Note:
1. The different color of the nodes denotes the level of the nodes.

Genetic/Epigenetic Locus	Protein and Other Molecule	Cell and Molecular Pathway	Neural System	Cognition and Behavior	Symptoms and Signs	Environment	MDD

2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web

Approved Symbol	Approved Name	Type	No. of Studies (Positive/Negative)
MIR30E	microRNA 30e	SNP mapped	0(0/0)
MIR30C1	microRNA 30c-1	SNP mapped	0(0/0)
NFYC	nuclear transcription factor Y, gamma	SNP mapped	0(0/0)