MK4MDD

SNP Report

Basic Information
Name rs1045642 dbSNP Ensembl
Location Chrchr7:87509329(Forward)
Variant Alleles A/G/T
Ancestral Allele G
No. of Studies (Positive/Negative) 1 (1/0) Help

Positive relationship between rs1045642 and MDD (count: 1)
Reference Research Type Statistical Result Relation Description Help
Fujii T, 2012 patients and normal controls chi(2) = 4.5, df = 1, P-value = 0.034, odds ratio [OR] 1.16, 95% confidential interval [CI] 1.01-1.34 The minor T3435 allele was significantly increased in MDD pa...... The minor T3435 allele was significantly increased in MDD patients than in the controls (chi(2) = 4.5, df = 1, p = 0.034, odds ratio [OR] 1.16, 95% confidential interval [CI] 1.01-1.34). Homozygotes for the T3435 allele was significantly more common in patients than in the controls (chi(2) = 7.5, df = 1, p = 0.0062, OR 1.43, 95%CI 1.11-1.85). More...

Relationships between rs1045642 and other components at different levels (count: 0) Help
Positive relationship network of rs1045642 in MK4MDD
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Note:
1. The different color of the nodes denotes the level of the nodes.
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
Genetic/Epigenetic Locus Protein and Other Molecule Cell and Molecular Pathway Neural System Cognition and Behavior Symptoms and Signs Environment MDD
2. User can drag the nodes to rearrange the layout of the network. Click the node will enter the report page of the node. Right-click will show also the menus to link to the report page of the node and remove the node and related edges. Hover the node will show the level of the node and hover the edge will show the evidence/description of the edge.
3. The network is generated using Cytoscape Web Cytoscape Web
Negative relationships between rs1045642 and MDD (count: 0)
Negative relationships between rs1045642 and other components at different levels (count: 0) Help
rs1045642 related genes (count: 1)